Storing Scientific Workflows in a Database
Summary: Evaluates ProtocolDB, a database for designing, storing, querying, and reusing scientific workflows. The TGen case study highlights database support for collaborative, translational research and workflow adaptation and reasoning. (summarized by gpt-5.6-luna on Jul 24 2026)
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Authors
- 1. Zoé Lacroix (Arizona State University; Translational Genomics Research Institute)
- 2. Christophe Legendre (Arizona State University)
- 3. Spyro Mousses (Translational Genomics Research Institute)
BibTeX Citation
@article{lacroix_vldb09,
title = {{Storing Scientific Workflows in a Database}},
author = {Lacroix, Zoé and Legendre, Christophe and Mousses, Spyro},
journal = {PVLDB},
series = {{VLDB} '09},
doi = {10.14778/1687553.1687575},
url = {https://doi.org/10.14778/1687553.1687575},
year = {2009}
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|---|---|---|---|---|
| 1 | 1,385 | Characteristics of Scientific Databases | 1984 | VLDB |
| 2 | 12,477 | Searching Workflows with Hierarchical Views | 2010 | VLDB |
| 3 | 6,889 | An Algebraic Approach for Data-Centric Scientific Workflows | 2011 | VLDB |
| 4 | 7,215 | Enabling Privacy in Provenance-Aware Workflow Systems | 2011 | CIDR |
| 5 | 4,437 | Workflow, Transactions and Datalog | 1999 | PODS |
| 6 | 9,089 | Querying and Re-Using Workflows with VisTrails | 2008 | SIGMOD |
| 7 | 8,934 | Similarity Search for Scientific Workflows | 2014 | VLDB |
| 8 | 9,904 | Databases and Workflow Management: What is it All About? | 1995 | VLDB |
| 9 | 1,871 | Efficient Lineage Tracking For Scientific Workflows | 2008 | SIGMOD |
| 10 | 919 | Provenance and Scientific Workflows: Challenges and Opportunities | 2008 | SIGMOD |