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Periscope/SQ: Interactive Exploration of Biological Sequence Databases

Summary: Periscope/SQ provides a declarative interface for large biological sequence databases, enabling rapid expression of complex queries. It leverages database-style optimization to deliver orders-of-magnitude speedups over procedural approaches, demonstrated by GeneLocator for interactive exploration. (summarized by gpt-5-nano on Feb 09 2026)

Paper ID
9756
Venue
VLDB
Year
2007
Pagerank
5.9425753e-05
Overall Rank
6,229 | 57.27%
DOI
-

Incoming Non-self Citations Over Time

Authors

BibTeX Citation

@article{tata_vldb07,
        title = {{Periscope/SQ: Interactive Exploration of Biological Sequence Databases}},
        author = {Tata, Sandeep and Lang, Willis and Patel, Jignesh M.},
        journal = {PVLDB},
        series = {{VLDB} '07},
        pages = {1406--1409},
        year = {2007}
}

Incoming Citations (Sorted by Pagerank)

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Rank Citing Paper Year Venue Pagerank
12,129 StarDB: A Large-Scale DBMS for Strings 2015 VLDB 5.093636e-05
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Citations counted here include only citations to other VLDB/SIGMOD/CIDR/PODS papers in this database.

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